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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813067.1_cds_XP_016497397.1_11524
CDS Infomation

[gene=LOC107816212] [db_xref=GeneID:107816212] [protein=RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2] [protein_id=XP_016497397.1] [location=complement(join(55443..55728,55881..56062,57682..57798,58439..58526,58657..58740,59451..59554,59733..59801,59880..59996,61230..61343,61433..61543,61748..61993,62073..62144,62239..62310,62413..62460))] [gbkey=CDS]
Sequence

ATGCACTGTAAGGAACGCCTTGTACCCGAGGAGGTTGCCCTACTGGTGACATGTTTAAAA
GCTTTGTCAGGATCAGTTTCTTGTCTAGACATTGTTCATCATCAAAGTCTCCTTTCATCT
ATTTTAGGAATGAGCATGTGGAACTATGGGACTGATGTAATGGATGCTTTGATGGAATTA
CTTATATCCTTGGCTACATCCGGTGGGCAGTATGTCGATTTGTGCTTGGAAATGCTTGTG
AACAATTTTGTGCCGCCTCCTTCATTCATATCGTTGTTGAATCAGCCACGTGGCATACTA
CGAAAGGGCCAAGTCATTGATCGTGTCCATTCAACTTTAATAGACATTGCAGAGTTAGTT
CCTCTCTCCCCCTTGAGACTTGAGAAGATAGTAAAGGAGAAGATGCAGAAGATGCCAATC
AATTACACAAAGGAACCATTCATCATGGCATATGTGGAGAACATGTTAAAACTGGAGGGT
GGAGCAATTGGTGGTCTTGTTGGGGGAACTATGCTTGTGGCAATTATGGATTGGCTGATA
GATTTGGATGTAGACATTGCATGGGATGAAATCTTAAATGAGGATTTCACCAAATGCATC
TTTGATATGGAGCTGGAAGATCTGGATGGTCCAGTAGATGACGGTCAGCAAGATGGTGAC
CAGCTCCGAATTTCTTGGATGGAACGGCTTGGAAATGCCAGTGCTCAAAAATTGGATAGC
TTGATGGTGCTTACCTTTGAACACCTTAACTTTTGCCAAGAGAGTGGACGCCTGAGTCAG
GTTTTTGAGACTCTTCTCCAGTCTTTTCAGCATACTGTTTTGACAGCATACAAGTCTAAA
TTTGCCCAGTTTGTCATGTTTTATGCCTGTACCCTGGATCCTGAAAACTGCGGCAGGAGA
TTTGCTGATACACTATTTGATATATTTAAGAGCAGTATCTATCCACAATGGAGAATGAGT
GCTGTTGCCTATCTTGCTAGTTATTTGGCTCGTACAAAGTTTTTGTCTATCTCATCTGTT
GCTGAATATGTAGAAAGTTTGGTTGAATGGTGTTCCACTTATTGCTCCAACCAGAGTGGT
GGCATCAATCCAAAAGCTCACAAGGAATTCTATGCTGGGTGCCAGGCCATGATGTACATA
CTTTGTTTTCGCATGAGATCAATGCTTGCTTATCCTCGTATCAGGTCACGGCTCTCAAAG
CACATAGAGGATATCCTGAGGCATCCATTGAGCCCATTAATGGTATGCTTGCCATCAGTA
GTGAAAGAATTTCTTCGGTTGGCAAAAGTAACTAATCTTGATGTGCCTGATAACTTTGTA
TCAAGTGGTCTGCTCGAGTCTGATCTTTCAATCTCTTTTGGTGGTAGAGAGAGGCTTGAC
ACATTTTTCCCATTTGATCCTTGTCTGCTATTGAGATCTGACAGATTCATCCGGCCAAAT
TTTGTGTACTGGTCAATGGTTCGGAGCTCATATGACAATGATGATGATGAGGGTACTAGT
GATGAAGACGATGTTGAAATTTGTACTGCAGGGAAGGGGATGAATATAGCTGATGGAGTC
GCCCGAAGTTATGATCAGGATCTCGATGAATTTGATCTTGAAATGAGCAAAATGTCCATA
ACACCTAAAGTTGCTCAATGGTTTGGAGGTGAATTACGACCTGATATGCAGATGCCTTCA
AGAATCAGACCATGTCCGGAGTCCTTGTAG

Peptide Sequence

PEP ID

XP_016497397.1
PEP Infomation

PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Nicotiana tabacum]
Sequence

MHCKERLVPEEVALLVTCLKALSGSVSCLDIVHHQSLLSSILGMSMWNYGTDVMDALMEL
LISLATSGGQYVDLCLEMLVNNFVPPPSFISLLNQPRGILRKGQVIDRVHSTLIDIAELV
PLSPLRLEKIVKEKMQKMPINYTKEPFIMAYVENMLKLEGGAIGGLVGGTMLVAIMDWLI
DLDVDIAWDEILNEDFTKCIFDMELEDLDGPVDDGQQDGDQLRISWMERLGNASAQKLDS
LMVLTFEHLNFCQESGRLSQVFETLLQSFQHTVLTAYKSKFAQFVMFYACTLDPENCGRR
FADTLFDIFKSSIYPQWRMSAVAYLASYLARTKFLSISSVAEYVESLVEWCSTYCSNQSG
GINPKAHKEFYAGCQAMMYILCFRMRSMLAYPRIRSRLSKHIEDILRHPLSPLMVCLPSV
VKEFLRLAKVTNLDVPDNFVSSGLLESDLSISFGGRERLDTFFPFDPCLLLRSDRFIRPN
FVYWSMVRSSYDNDDDEGTSDEDDVEICTAGKGMNIADGVARSYDQDLDEFDLEMSKMSI
TPKVAQWFGGELRPDMQMPSRIRPCPESL

Transcript Sequence

Gene sequence data has not been registered.